Tag: DCA

DCA 1.1 – Divide-and-Conquer Multiple Sequence Alignment

DCA 1.1

:: DESCRIPTION

DCA (Divide-and-Conquer Multiple Sequence Alignment) is a program for producing fast, high quality simultaneous multiple sequence alignments of amino acid, RNA, or DNA sequences. The program is based on the DCA algorithm, a heuristic approach to sum-of-pairs (SP) optimal alignment that has been developed at the FSPM over the years 1995-97.

::DEVELOPER

Jens Stoye

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

DCA

:: MORE INFORMATION

Citation

Divide-and-Conquer Multiple Sequence Alignment
J. Stoye
Dissertation Thesis. Universität Bielefeld, Forschungsbericht der Technischen Fakultät, Abteilung Informationstechnik, Report 97-02, 1997. (ISSN 0946-7831)

SimCell 1.8.0b – DCA Cell simulator

SimCell 1.8.0b

:: DESCRIPTION

SimCell is a DCA Cell simulator used to simulate cellular and biochemical processes.The user, through the use of the SimCell Interface may create: small molecules, membrane, membrane proteins, protein/RNA molecules, DNA molecules and Genes. These cellular components can then interact amongst themselves to create fascinating new processes.

::DEVELOPER

Wishart Pharmaceutical Research Group

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Mac OsX/ Windows

:: DOWNLOAD

 SimCell

:: MORE INFORMATION

Citation

David S. Wishart, Robert Yang, David Arndt, Joseph Cruz and Peter Tang.
Dynamic cellular automata: a simple but powerful approach to cellular simulation.
In Silico Biology 4, 0015 (2004)

Exit mobile version