ORCA – Genomics Research Container Architecture

ORCA

:: DESCRIPTION

ORCA is a platform for bioinformatics analysis. It is suited for those wishing to conduct self-serve analysis using their own existing data. Hundreds of bioinformatics tools from Brewsci/bio are installed in the ORCA Docker image using Linuxbrew.

::DEVELOPER

BC Cancer Canada’s Michael Smith Genome Sciences Centre

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

ORCA

:: MORE INFORMATION

Citation

Jackman SD, Mozgacheva T, Chen S, O’Huiginn B, Bailey L, Birol I, Jones SJM.
ORCA: a comprehensive bioinformatics container environment for education and research.
Bioinformatics. 2019 Nov 1;35(21):4448-4450. doi: 10.1093/bioinformatics/btz278. PMID: 31004474; PMCID: PMC6821186.

BioShaDock – A Curated BioInformatics Container Registry

BioShaDock

:: DESCRIPTION

BioShaDock is a bioinformatics-focused Docker registry, which provides a local and fully controlled environment to build and publish bioinformatic software as portable Docker images.

::DEVELOPER

BioShaDock team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

BioShaDock

:: MORE INFORMATION

Citation

BioShaDock: a community driven bioinformatics shared Docker-based tools registry.
Moreews F, Sallou O, Ménager H, Le Bras Y, Monjeaud C, Blanchet C, Collin O.
F1000Res. 2015 Dec 14;4:1443. doi: 10.12688/f1000research.7536.1. eCollection 2015.

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