Cola a1
:: DESCRIPTION
Cola consists of an efficient implementation of a collection of sequence alignment algorithms, extending the Smith-Waterman and Smith-Waterman-Gap-Affine methods by the ability to apply a scoring function that is an arbitrary function of the size of consecutive nucleotide matches.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / MacOsX
- C++ Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Source Code Biol Med. 2014 Jun 9;9:12. doi: 10.1186/1751-0473-9-12. eCollection 2014.
Modular and configurable optimal sequence alignment software: Cola.
Zamani N1, Sundström G1, Höppner MP1, Grabherr MG