Tag: Cancer Type

LinkedOmics – Analyzing Multi-omics data within and across 32 Cancer Types

LinkedOmics

:: DESCRIPTION

LinkedOmics is publicly available portal that includes multi-omics data from all 32 TCGA Cancer types and 10 Clinical Proteomics Tumor Analysis Consortium (CPTAC) cancer cohorts.

::DEVELOPER

the Zhang Lab

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

NO

:: MORE INFORMATION

Citation

Vasaikar SV, Straub P, Wang J, Zhang B.
LinkedOmics: analyzing multi-omics data within and across 32 cancer types.
Nucleic Acids Res. 2018 Jan 4;46(D1):D956-D963. doi: 10.1093/nar/gkx1090. PMID: 29136207; PMCID: PMC5753188.

Tumorscape 1.6 – Copy Number Alterations Across Multiple Cancer Types

Tumorscape 1.6

:: DESCRIPTION

The Tumorscape portal facilitates the use and understanding of high resolution copy number data amassed from multiple cancer types. It supports gene-level analysis, analysis by cancer type, and the downloading/browsing of data.

::DEVELOPER

Broad Institute

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Server

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Beroukhim R, Mermel CH, Porter D, Wei G, Raychaudhuri S, Donovan J, Barretina J, Boehm JS, Dobson J, Urashima M. et al.
The landscape of somatic copy-number alteration across human cancers.
Nature. 2010;463:899–905. doi: 10.1038/nature08822.

Exit mobile version