BS Seeker 2.1.8
:: DESCRIPTION
BS Seeker (Bisulfite sequencing) performs accurate and fast mapping of bisulfite-treated short reads. It aligns Bisulfite-treated reads generated from the Cokus et al’s library protocol (with tags) or the Lister et al’s library protocol (with no tags).
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Bowtie
- Python
:: DOWNLOAD
:: MORE INFORMATION
Citation:
BMC Genomics. 2013 Nov 10;14:774. doi: 10.1186/1471-2164-14-774.
BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data.
Guo W, Fiziev P, Yan W, Cokus S, Sun X, Zhang MQ, Chen PY1, Pellegrini M.
BMC Bioinformatics. 2010 Apr 23;11:203.
BS Seeker: precise mapping for bisulfite sequencing.
Chen PY, Cokus SJ, Pellegrini M.