Tag: BIANA

BIANA 1.4.5 – Biologic Interaction and Network Analysis

BIANA 1.4.5

:: DESCRIPTION

BIANA (Biologic Interactions and Network Analysis) is a biological database integration and network management framework written in Python. It uses a high level abstraction schema to define databases providing any kind of biological information (both individual entries and their relationships).

::DEVELOPER

Structural BioInformatics Lab

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 BIANA

:: MORE INFORMATION

Citation

Biana: a software framework for compiling biological interactions and analyzing networks.
Garcia-Garcia J, Guney E, Aragues R, Planas-Iglesias J, Oliva B.
BMC Bioinformatics. 2010 Jan 27;11:56.

BIPS – Predict putative protein-protein interactions based on Homology

BIPS

:: DESCRIPTION

 BIPS (Biana Interolog Prediction Server) can predict putative interactions between proteins based on homologs found in Protein-Protein interaction databases. BIPS relies on data integrated in BIANA. You just need to insert your sequences of interest or list of protein identifiers, and BIPS will infer interactions based on homology. Predicted partners can be restricted to proteins added in your list or to the complete BIANA database.

::DEVELOPER

Structural BioInformatics Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 No

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W147-51. Epub 2012 Jun 11.
BIPS: BIANA Interolog Prediction Server. A tool for protein-protein interaction inference.
Garcia-Garcia J, Schleker S, Klein-Seetharaman J, Oliva B.

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