ALIFRITZ 1.0

:: DESCRIPTION

ALIFRITZ performs statistical multiple alignment and phylogeny reconstruction simultaneously. It  implements a strategy based on simulated annealing which makes use of these models to infer a phylogenetic tree for a set of DNA or protein sequences together with the sequences’ indel history, i.e. their multiple alignment augmented with information about the positioning of insertion and deletion events in the tree.

::DEVELOPER

 the Center of Integrative Bioinformatics Vienna (CIBIV) headed by Arndt von Haeseler.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

 ALIFRITZ

:: MORE INFORMATION

Citation:

Roland Fleißner, Dirk Metzler and Arndt von Haeseler,
Simultaneous Statistical Multiple Alignment and Phylogeny Reconstruction.
Syst. Biol., 54, 548-561