SalmonTE 0.4 – Ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances

SalmonTE 0.4

:: DESCRIPTION

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances from Next Generation Sequencing Data.

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:: DEVELOPER

Liu Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python / R

:: DOWNLOAD

SalmonTE

:: MORE INFORMATION

Citation

Jeong HH, Yalamanchili HK, Guo C, Shulman JM, Liu Z.
An ultra-fast and scalable quantification pipeline for transposable elements from next generation sequencing data.
Pac Symp Biocomput. 2018;23:168-179. PMID: 29218879.

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