MtreeHMM 0.1.01
:: DESCRIPTION
MtreeHMM is a Perl program that implements the Expectation Maximization algorithm described in (Beerenwinkel & Drton, 2007) for estimating the parameters of the mutagenetic tree hidden Markov model from longitudinal clonal sequence data.
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::DEVELOPER
the Computational Biology Group (CBG)
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows / Linux / MacOSX
- Perl
:: DOWNLOAD
:: MORE INFORMATION
Citation
Beerenwinkel N, Drton M (2007).
A mutagenetic tree hidden Markov model for longitudinal clonal HIV sequence data.
Biostatistics 8(1):53-71.