Mango 1.0.3
:: DESCRIPTION
Mango is a complete ChIA-PET (Chromatin Interaction Analysis by Paired-End Tag sequencing) data analysis pipeline that provides statistical confidence estimates for interactions and corrects for major sources of bias including differential peak enrichment and genomic proximity.
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::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- R
- Bowtie
- Bedtools
- MACS2
:: DOWNLOAD
:: MORE INFORMATION
Citation
Mango: A bias correcting ChIA-PET analysis pipeline.
Phanstiel DH, Boyle AP, Heidari N, Snyder MP.
Bioinformatics. 2015 Jun 1. pii: btv336.