clonealign 2.0
:: DESCRIPTION
clonealign assigns single-cell RNA-seq expression to cancer clones by probabilistically mapping RNA-seq to clone-specific copy number profiles using reparametrization gradient variational inference.
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::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / MacOsX / Windows
- R
:: DOWNLOAD
:: MORE INFORMATION
Citation
Genome Biol. 2019 Mar 12;20(1):54. doi: 10.1186/s13059-019-1645-z.
clonealign: statistical integration of independent single-cell RNA and DNA sequencing data from human cancers.
Campbell KR, etc.