BVTech Plasmid is DNA sequence analysis and plasmid drawing software for Windows PCs. You can use it to plan your DNA cloning, draw high quality plasmid maps, analyse your DNA sequencing data, align sequences, and much more. BVTech Plasmid is easy to use, powerful, and affordable for molecular biologists at any level.
PlasMapper automatically generates and annotates plasmid maps using only the plasmid DNA sequence as input. Plasmid sequences up to 20,000 bp may be annotated and displayed. Plasmid figures may be rendered in PNG, JPG, SVG or SVGZ format. PlasMapper supports an extensive array of display options.
XPlasMap is a DNA mapping program. It draws plasmid or linear DNA maps, showing features such as genes, multiple cloning sites, and restriction sites. The maps are highly customizable: colors, styles, position, and overall appearance of features can be changed. Fragments can be copied or cut, and inserted into different maps or turned into maps on their own (virtual cloning). FastA, text, and GenBank files can be imported directly, making maps of long and complex sequences (e.g. genomic sequences) quick and easy to prepare.
NoeClone integrates cloning design, map and flowchart drawing, sequence analysis, and result presentation in one coherent system as the “Office for the biologist”.
WinDrawChem is a freeware two-dimensional molecule drawing program for Windows. It is similar in functionality to other molecule drawing programs such as ChemDraw (TM, CambridgeSoft). It can read and write MDL Molfiles to allow sharing between XDrawChem and other chemistry applications, as well as read ChemDraw binary and text files.
MCDL (Modular Chemical Descriptor Language) is a small Java molecular viewer/editor for chemical structures, stored in Modular Chemical Descriptor Language linear notation. The editor supports the MCDL format, in which structures are presented in compact canonical form and is capable of restoring bond orders as well as of managing atom and bond drawing overlap. A small database of cage and large cyclic fragment is used for optimal representation of difficult-to-draw molecules. The improved algorithm of the structure diagram generation can be used for other chemical notations that lack atomic coordinates (SMILES, InChI).
::DEVELOPER
Sergei Trepalin (Institute of Physiologically Active Compounds RAS)
JMolDraw is a small Java-Applet for drawing organic structures on your computer. The applet also supports Im/Export of MDL-Molfiles, drawing of Query-Atoms for database search, templates and much more.