TFM-CUDA 0.5
:: DESCRIPTION
TFM-CUDA is a CUDA implementation of parallel algorithms able to:
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- scan a matrix or a set of matrices against a sequence (see also TFM-Scan),
- compute the P-value corresponding to a score, or the score corresponding to a Pvalue (see also TFM-Pvalue),
- compare two matrices
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/MacOsX/Windows
- C++ Compiler
- NVIDIA CUDA SDK
:: MORE INFORMATION
Citation
Mathieu Giraud and Jean-Stéphane Varré,
Parallel Position Weight Matrices Algorithms,
Parallel Computing, 10.1016/j.parco.2010.10.001