:: DESCRIPTION
SAGExplore is a server for the mapping of SAGE tags against a genomic annotation.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W163-8. Epub 2007 Jul 10.
SAGExplore: a web server for unambiguous tag mapping in serial analysis of gene expression oriented to gene discovery and annotation.
Norambuena T, Malig R, Melo F.
:: DESCRIPTION
HapTagger is a software for finding tag SNPs. HapTagger is compared with existing methods as well as the official tagging tool (called Haploview) of the International HapMap project using a variety of real data sets.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Huang, Y.-T. and Chao, K.-M., 2008,
“A New Framework for the Selection of Tag SNPs by Multimarker Haplotypes”
Journal of Biomedical Informatics, 6: 953-961.
:: DESCRIPTION
mPopTag (Multi-Population Tag SNP Picker) is a tool used to select or evaluate linkage disequilibrium (LD) tag SNPs for multiple populations. The program analyzes patterns of LD–measured by composite linkage disequilibrium (CLD) or r2–between polymorphic sites in a genome region for multiple populations. It also uses an agreedy algorithm to select a single set of near-minimum numbers of LD tag SNPs for multiple populations.
::DEVELOPER
Jack A. Taylor, M.D., Ph.D. , Zongli Xu, Ph.D.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Xu Z, Kaplan NL, Taylor JA.
Tag SNP selection for candidate gene association studies using HapMap and gene resequencing data.
Eur J Hum Genet 2007 Oct;15(10):1063-70.
:: DESCRIPTION
trace2dbEST process raw sequenceing chromatograph trace files from EST projects into quality-checked sequences, ready for submission to dbEST. trace2dbEST guides you through the creation of all the necessary files for submission of ESTs to dbEST.
::DEVELOPER
The Blaxter Lab at The Institute of Evolutionary Biology University of Edinburgh
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
J Parkinson, A Anthony, J Wasmuth, R Schmid, A Hedley, M Blaxter: PartiGene—constructing partial genomes, Bioinformatics 2004 20(9):1398-404).
