HATSEQ / HAT
:: DESCRIPTION
HATSEQ / HAT increased specificity for analysis of tiling-array data in comparison with alternative methods, and that it accurately detected regions-of-interest in different applications of tiling-arrays.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
- Linux / Windows / MacOsX
- Matlab
:: DOWNLOAD
:: MORE INFORMATION
Citation
Adv Appl Bioinform Chem. 2013 Oct 25;6:55-62. doi: 10.2147/AABC.S51271. eCollection 2013.
Hypergeometric analysis of tiling-array and sequence data: detection and interpretation of peaks.
Taskesen E1, Hoogeboezem R, Delwel R, Reinders MJ.
HAT: hypergeometric analysis of tiling-arrays with application to promoter-GeneChip data.
Taskesen E, Beekman R, de Ridder J, Wouters BJ, Peeters JK, Touw IP, Reinders MJ, Delwel R.
BMC Bioinformatics. 2010 May 21;11:275.