VARUS 1.0.0 – Drawing Diverse Samples from RNA-Seq Libraries

VARUS 1.0.0

:: DESCRIPTION

VARUS automates the selection and download of a limited number of RNA-seq reads from at NCBI’s Sequence Read Archive (SRA) targeting a sufficiently high coverage for many genes for the purpose of gene-finder training and genome annotation.

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::DEVELOPER

Bioinformatics Greifswald

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

VARUS

:: MORE INFORMATION

Citation

Stanke M, Bruhn W, Becker F, Hoff KJ.
VARUS: sampling complementary RNA reads from the sequence read archive.
BMC Bioinformatics. 2019 Nov 8;20(1):558. doi: 10.1186/s12859-019-3182-x. PMID: 31703556; PMCID: PMC6842140.

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