UnoSeq 1.0 – Expression Profiling with Next Generation Sequencing without a Reference Genome

UnoSeq 1.0

:: DESCRIPTION

UnoSeq is a Java library to analyze next generation sequencing data (e.g. data generated by Illumina’s mRNAseq method) and especially perform expression profiling in organisms where no well-annotated reference genome exists.

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::DEVELOPER

UnoSeq team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / Mac OsX.
  • Java
  • Bowtie
  • Velvet
  • BLAST

:: DOWNLOAD

 UnoSeq

:: MORE INFORMATION

Citation

Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing.
Birzele F, Schaub J, Rust W, Clemens C, Baum P, Kaufmann H, Weith A, Schulz TW, Hildebrandt T.
Nucleic Acids Res. 2010 Jul;38(12):3999-4010. doi: 10.1093/nar/gkq116.

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