Turtle 0.3.1 – Identifying Frequent k-mers with Cache-efficient Algorithms

Turtle 0.3.1

:: DESCRIPTION

Turtle is a novel method that balances time, space and accuracy requirements to efficiently extract frequent k-mers even for high coverage libraries and large genomes such as human.

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::DEVELOPER

Schliep lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • GCC

:: DOWNLOAD

 Turtle

:: MORE INFORMATION

Citation

Roy, Rajat S. and Bhattacharya, Debashish and Schliep , Alexander.
Turtle: Identifying frequent k-mers with cache-efficient algorithms 
Bioinformatics. 2014 Apr 2.