TinT – Screening for Nested Transpositions from Genome Assemblies or Trace data

TinT

:: DESCRIPTION

TinT (Transposition in Transposition) affords an easy, automated screening for nested transpositions from genome assemblies or trace data, assembles them in a frequency-matrix, and schematically displays their chronological activity history

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::DEVELOPER

Institute of Bioinformatics WWU Muenster

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Window / MacOsX
  • Java

:: DOWNLOAD

 TinT

:: MORE INFORMATION

Citation

Churakov G, Grundmann N, Kuritzin A, Brosius J, Makalowski W, Schmitz J. (2010)
A Novel Web-Based TinT Application and the Chronology of the Primate Alu Retroposon Activity.
BMC Evolutionary Biology 10:376.