Tigmint v1.2.4 – Correct Misassemblies using linked AND long reads

Tigmint v1.2.4

:: DESCRIPTION

Tigmint identifies and corrects misassemblies in genomes using linked (e.g. MGI’s stLFR, 10x Genomics Chromium) or long (e.g. Oxford Nanopore Technologies long reads) DNA sequencing reads.

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::DEVELOPER

BC Cancer Canada’s Michael Smith Genome Sciences Centre

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

Tigmint

:: MORE INFORMATION

Citation

Jackman SD, Coombe L, Chu J, Warren RL, Vandervalk BP, Yeo S, Xue Z, Mohamadi H, Bohlmann J, Jones SJM, Birol I.
Tigmint: correcting assembly errors using linked reads from large molecules.
BMC Bioinformatics. 2018 Oct 26;19(1):393. doi: 10.1186/s12859-018-2425-6. PMID: 30367597; PMCID: PMC6204047.

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