TF-Finder – Idenitifying Regulatory Genes involved in a Biological Process

TF-Finder

:: DESCRIPTION

TF-finder can be successfully used to infer novel transcription factors (TFs) involved a biological process of interest using publicly available gene expression data and known positive genes from existing knowledge bases.

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::DEVELOPER

TF-Finder team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • R
  • Perl

:: DOWNLOAD

 TF-finder

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2010 Aug 12;11:425. doi: 10.1186/1471-2105-11-425.
TF-finder: a software package for identifying transcription factors involved in biological processes using microarray data and existing knowledge base.
Cui X1, Wang T, Chen HS, Busov V, Wei H.