TEMT 1.0 – Transcripts Abundances Estimation from Heterogeneous Tissue sample of RNA-Seq data

TEMT 1.0

:: DESCRIPTION

TEMT (Transcript Estimation from Mixed Tissue samples) is a tool for transcripts abundances estimation from heterogeneous tissue sample of RNA-Seq data

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::DEVELOPER

CBCL Lab (Computational Biology and Computational Learning) @ UCI

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/MacOsX
  • Python

:: DOWNLOAD

 TEMT

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2013;14 Suppl 5:S11. doi: 10.1186/1471-2105-14-S5-S11. Epub 2013 Apr 10.
A mixture model for expression deconvolution from RNA-seq in heterogeneous tissues.
Li Y1, Xie X.