3D-XCI – Inferring Three-dimensional Structures of the X-chromosome during X-inactivation

3D-XCI

:: DESCRIPTION

3D-XCI is a lattice-based 3D modeling tool for generating accurate and stable high-resolution 3D chromosome structures based on population Hi-C data.

::DEVELOPER

Z. WANG LAB

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

3D-XCI

:: MORE INFORMATION

Citation

Zhu H, Wang N, Sun JZ, Pandey RB, Wang Z.
Inferring the three-dimensional structures of the X-chromosome during X-inactivation.
Math Biosci Eng. 2019 Aug 12;16(6):7384-7404. doi: 10.3934/mbe.2019369. PMID: 31698618; PMCID: PMC7772933.

KinInbcoefX 2.0 – Calculation of X-chromosome Kinship Coefficients

KinInbcoefX 2.0

:: DESCRIPTION

KinInbcoefX is a C++ program that calculates X-chromosome kinship coefficients for pairs of individuals (and X-chromosome inbreeding coefficients for each individual), based on pedigree and sex information.

::DEVELOPER

Qian Zhang, Catherine Bourgain,  Mary Sara McPeek

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  Windows / MacOsX
  • C Compier

:: DOWNLOAD

  KinInbcoefX

:: MORE INFORMATION