:: DESCRIPTION
TweenMotif is an interactive Windows program for visualizing the locations of a specified target motif within a set of sequences, as well as the gaps between the repeating motifs. The program creates a summary table of the frequency counts of the gap sequences that can be pasted into an Excel spreadsheet for further analysis
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
Jimp is a free program for visualizing and manipulating molecules.
::DEVELOPER
Josiah Manson and Charles Edwin Webster under the supervision of Dr. Michael Hall
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Hall, M. B.; Fenske, R. F. Inorg. Chem. 1972, 11, 768.
:: DESCRIPTION
ARCADE (A Real Time Comparative Analysis Display Environment) performs comparative queries over two or more distributed and potentially heterogeneous databases.The existence of large amounts of genomic information from many species on different databases means that sophisticated tools are required to retrieve the information important to a user and to display it a coherent manner. Furthermore, since information about one species can be used to aid research on closely related species there is great need for tools to be able to perform complex comparative queries. For example, the conserved gene order found in some cereals may be exploited to locate homologous genes in related species. ARCADE is a software tool for carrying out such comparative queries across many different sources and to display the results of these queries in a suitable coherent format.
::DEVELOPER
DICKS COMPUTATIONAL BIOLOGY GROUP
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Couchman M, Davenport G and Dicks J (2002)
A real-time comparative analysis display environment (ARCADE).
Genome Informatics, Hinxton
:: DESCRIPTION
GenescanView is the free software for the visualization of files generated with automatic ABI sequencers.GenescanView allows to visualize genescan files (.fsa format from ABI PRISM sequencers) and to view the exact peak size.
::DEVELOPER
at CRIBI (University of Padova) by Davide Campagna
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
N/A
:: DESCRIPTION
bioView is an open source and cross-platform application intended for biologists to visualize EM, Confocal, etc. imagery. It also provides access from the remote controller that simplifies usage of the very large screens e.g. 8000×4800 pixels composed by many monitorsa and is used on iWall.
bioView can receive external control clients, it uses TCP/IP connection and listens on the port specified in wv.ini file, the default is 9229. Upon connection client will receive preview of currently open image and enable controls.
::DEVELOPER
The Center for Bio-Image Informatics
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Kristian Kvilekval, Dmitry Fedorov, Boguslaw Obara, Ambuj Singh and B.S. Manjunath,
“Bisque: A Platform for Bioimage Analysis and Management”
Bioinformatics, vol. 26, no. 4, pp. 544-552, Feb. 2010.
