VelvetK 20120606 – Find a reasonable K-mer size to Assemble Genome Reads with Velvet

VelvetK 20120606

:: DESCRIPTION

VelvetK can estimate the best k-mer size to use for your Velvet de novo assembly. It needs two inputs: the estimated genome size, and all your sequence read files. The genome size can be supplied as as a number (eg. 3.5M) or as a FASTA file of a closely related genome.

::DEVELOPER

Torsten Seemann

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

 VelvetK

:: MORE INFORMATION