VariationToolkit r387
:: DESCRIPTION
VariationToolkit is a set of C++ tools for the interpretation of VCF data.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/MacOsX / Windows
- C++ Compiler
:: DOWNLOAD
:: MORE INFORMATION
Tag: VCF Files
vcflib 1.0.2 – C++ Library for Parsing and Manipulating VCF files
vcflib 1.0.2
:: DESCRIPTION
vcflib is a simple C++ library for parsing and manipulating Variant Call Format (VCF) files, + many command-line utilities
::DEVELOPER
Erik Garrison erik.garrison@bc.edu
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ Windows/ MacOSX
- C++ Compiler
:: DOWNLOAD
:: MORE INFORMATION
VCF-Miner 4.0.1 – Analysis of VCF files
VCF-Miner 4.0.1
:: DESCRIPTION
VCF-Miner is a graphical user interface for sorting, filtering and querying information encoded in VCF (Variant Call Format) files.
::DEVELOPER
Bioinformatics Program, Division of Biomedical Statistics and Informatics, Mayo Clinic Research
:: SCREENSHOTS
:: REQUIREMENTS
- Linux / Windows
:: DOWNLOAD
:: MORE INFORMATION
Citation
VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files.
Hart SN, Duffy P, Quest DJ, Hossain A, Meiners MA, Kocher JP.
Brief Bioinform. 2016 Mar;17(2):346-51. doi: 10.1093/bib/bbv051.
VarMatch – Matching Variants in VCF files
VarMatch
:: DESCRIPTION
VarMatch: robust matching of small variant datasets using flexible scoring schemes
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Python
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Bioinformatics, 33 (9), 1301-1308 2017 May 1
VarMatch: Robust Matching of Small Variant Datasets Using Flexible Scoring Schemes
Chen Sun , Paul Medvedev