MASQOT-GUI 1.0.1 – Two-channel Microarray Spot Quality Control

MASQOT-GUI 1.0.1

:: DESCRIPTION

MASQOT-GUI provides an open-source, platform-independent software pipeline for two-channel microarray spot quality control. This includes gridding, segmentation, quantification, quality assessment and data visualization. It hosts three independent applications (MASQOTGrid, MASQOTSeg and MASQOTView) for this purpose with interactions between the tools as well as import and export support for external software.

::DEVELOPER

MASQOT-GUI team

:: SCREENSHOTS

MASQOT-GUI

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Java

:: DOWNLOAD

 MASQOT-GUI

:: MORE INFORMATION

Citation

Bioinformatics. 2006 Oct 15;22(20):2554-5. Epub 2006 Aug 9.
MASQOT-GUI: spot quality assessment for the two-channel microarray platform.
Bylesjö M1, Sjödin A, Eriksson D, Antti H, Moritz T, Jansson S, Trygg J.

OLIN 1.68.0 – Optimized Normalization, Visualization and Quality Testing of two-channel Microarray data

OLIN 1.68.0

:: DESCRIPTION

OLIN (Optimised Local Intensity-dependent Normalisation) is the software developed for optimized normalization.

::DEVELOPER

SysBioLab

:: SCREENSHOTS

OLIN

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • R package
  • BioConductor
  • R-TclTk

:: DOWNLOAD

 OLIN

:: MORE INFORMATION

Citation

Bioinformatics. 2005 Apr 15;21(8):1724-6.
OLIN: optimized normalization, visualization and quality testing of two-channel microarray data.
Futschik ME, Crompton T.