TWILIGHT 1.68.0 – Estimating the Local False Discovery Rate

TWILIGHT 1.68.0

:: DESCRIPTION

twilight is an R/Bioconductor package that includes several functions for the statistical analysis of two-condition microarray data.

::DEVELOPER

Institute of Functional Genomics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux / MacOsX
  • R/Bioconductor

:: DOWNLOAD

 TWILIGHT

:: MORE INFORMATION

Citation

twilight; a Bioconductor package for estimating the local false discovery rate.
Scheid S, Spang R.
Bioinformatics. 2005 Jun 15;21(12):2921-2.

Twilight 1.13 – A tool for Ligand Density Validation

Twilight 1.13

:: DESCRIPTION

Twilight is a standalone script for analysis, visualization, and annotation of a pre-filtered set of protein/ligand complexes deposited with the PDB with ligand RSCC values that are below a threshold of 0.6.

::DEVELOPER

Twilight team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • Python

:: DOWNLOAD

 Twilight

:: MORE INFORMATION

Citation:

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Feb 1;69(Pt 2):195-200. doi: 10.1107/S1744309112044387.
Visualizing ligand molecules in Twilight electron density.
Weichenberger CX1, Pozharski E, Rupp B.