FunNet 1.00-3
:: DESCRIPTION
“FunNet” is an integrative tool for analyzing gene co-expression networks from microarray expression data. The analytic model implemented in this library involves two abstraction layers: transcriptional and functional (biological roles). A functional profiling technique using Gene Ontology and KEGG annotations is applied to extract a list of relevant biological themes from microarray expression profiling data.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / MacOsX / Windows
- R package
:: DOWNLOAD
:: MORE INFORMATION
Citation
FunNet: an integrative tool for exploring transcriptional interactions
Prifti E, Zucker JD, Clément K and Henegar C.
Bioinformatics 2008, doi: 10.1093/bioinformatics/btn492.