EhecRegNet v2 – Database of Pathogenic E. coli Transcriptional Gene Regulatory Networks

EhecRegNet v2

:: DESCRIPTION

EhecRegNet is a database of gene regulations conserved between E. coli K12 and human pathogenic EHEC strains.

::DEVELOPER

Baumbach lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

:: MORE INFORMATION

Citation

Integr Biol (Camb). 2012 Jul;4(7):728-33. doi: 10.1039/c2ib00132b.
On the trail of EHEC/EAEC–unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria.
Pauling J1, Röttger R, Neuner A, Salgado H, Collado-Vides J, Kalaghatgi P, Azevedo V, Tauch A, Pühler A, Baumbach J.

:: DESCRIPTION

CoryneRegNet is the international reference database for corynebacterial transcriptional gene regulatory interactions.

::DEVELOPER

Baumbach lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

:: MORE INFORMATION

Citation

CoryneRegNet 6.0–Updated database content, new analysis methods and novel features focusing on community demands.
Nucleic Acids Res. 2012 Jan;40(Database issue):D610-4. doi: 10.1093/nar/gkr883
Pauling J1, Röttger R, Tauch A, Azevedo V, Baumbach J.

:: DESCRIPTION

Twixtrix is a Matlab and R tool for inferring context-specific transcriptional regulatory networks from gene expression data

::DEVELOPER

Tom Michoel

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

Twixtrix

:: MORE INFORMATION

Citation: