HINT 0.1.1 – Hmm-based IdeNtification of Tf footprints

HINT 0.1.1

:: DESCRIPTION

HINT integrates both DNase I hypersensitivity and histone modifications for the detection of open chromatin regions and active binding sites.

::DEVELOPER

IZKF Computational Biology and Bioinformatics Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

 HINT

:: MORE INFORMATION

Citation:

Bioinformatics. 2014 Nov 15;30(22):3143-51. doi: 10.1093/bioinformatics/btu519. Epub 2014 Aug 1.
Detection of active transcription factor binding sites with the combination of DNase hypersensitivity and histone modifications.
Gusmao EG, Dieterich C, Zenke M, Costa IG