AGapEs
:: DESCRIPTION
AGapEs (ancestral gap estimation) is an optimization-based mathod to fill in inter-contig gaps using a combination of a template obtained from related extant genomes and aDNA reads.
::DEVELOPER
Computational Methods for Paleogenomics and Comparative Genomics
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
Luhmann N, Doerr D, Chauve C.
Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes.
Microb Genom. 2017 Jul 8;3(9):e000123. doi: 10.1099/mgen.0.000123. PMID: 29114402; PMCID: PMC5643016.