IncaRNAtion – Design of RNA Sequences with Targeted Secondary Structure and Nucleotide Distribution

IncaRNAtion

:: DESCRIPTION

IncaRNAtion is a novel algorithm to design RNA sequences folding into target secondary structures with a predefined nucleotide distribution.

::DEVELOPER

Computer Science and Biology at McGill

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • Python

:: DOWNLOAD

 IncaRNAtion

:: MORE INFORMATION

Citation:

Bioinformatics. 2013 Jul 1;29(13):i308-15. doi: 10.1093/bioinformatics/btt217.
A weighted sampling algorithm for the design of RNA sequences with targeted secondary structure and nucleotide distribution.
Reinharz V1, Ponty Y, Waldispühl J.