sparseQuant 20130910 – Targeted Protein Quantification using Sparse Reference Labeling

sparseQuant 20130910

:: DESCRIPTION

sparseQuant implements a novel statistical approach for design and analysis of label-sparse selected reaction monitoring (SRM)-based targeted proteomic experiments. Label-sparse experiments strike a middle ground between the label-free and fully label-based approaches, by utilizing a reduced set of labeled reference transitions and accurately quantifying an expanded list of proteins.

::DEVELOPER

Ching-Yun (Veavi) Chang

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX/ Windows
  • R package

:: DOWNLOAD

  sparseQuant

:: MORE INFORMATION

Citation

Ching-Yun Chang, Eduard Sabidó, Ruedi Aebersold, Olga Vitek.
Targeted protein quantification using sparse reference labeling
Nat Methods. 2014 Mar;11(3):301-4. doi: 10.1038/nmeth.2806