SVGen v1 – Simulation of Structural Variants in Next-generation Sequencing data

SVGen v1

:: DESCRIPTION

SVGen is a tool with an extensive range of options to simulate germline and somatic SVs of various types and from short and long read sequencing platforms. The output from SVGen include BED files with SV regions, FASTA files with the simulated genome sequence and FASTQ files for short or long reads.

::DEVELOPER

Wang Genomics Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

SVGen

:: MORE INFORMATION

Citation

LA Lima, H Yang, C Dong, K Wang.
SVGen: Simulation of structural variants in next-generation sequencing data.
(submitted)