SAAB+ v1.0.0 – Structural Annotation of BCR Repertoires

SAAB+ v1.0.0

:: DESCRIPTION

SAAB+ is a software of annotation of BCR Repertoires with structural information, using separate tools to map CDR loop sequences to repersentative antibody structures.

::DEVELOPER

the Oxford Protein Informatics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Python

:: DOWNLOAD

SAAB+

:: MORE INFORMATION

StarPDB – BLAST-based Structural Annotation of a Protein

StarPDB

:: DESCRIPTION

A web-server StarPDB has been developed for structural annotation of a protein based on its similarity with known protein structures.

::DEVELOPER

StarPDB team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

BLAST-based structural annotation of protein residues using Protein Data Bank.
Singh H, Raghava GP.
Biol Direct. 2016 Jan 25;11(1):4. doi: 10.1186/s13062-016-0106-9.

BAR+ – Functional and Structural Annotation of Protein sequences

BAR+

:: DESCRIPTION

BAR+ (Bologna Annotation Resource)is a server for the annotation of protein sequences relying on a comparative large-scale genome analysis across 988 species and the entire UniProt. With BAR+ and a sequence/set of sequences (maximum number per run=50) you can annotate when possible: function (Gene Ontology), structure and ligands (Protein Data Bank), structural classification (SCOP), protein domains (Pfam). Also if your sequence falls into a cluster with a structural/some structural template/s we provide an alignment towards the template/templates based on the Cluster-HMM (HMM profile) that allows you to directly compute your 3D model. Cluster HMMs (over 10.000) are available for downloading.

::DEVELOPER

Bologna Biocomputing Group

:: SCREENSHOTS

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 No, Only Web Service

:: MORE INFORMATION

Citation

Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Andrea Zauli, Ivan Rossi and Rita Casadio.
BAR-PLUS: the Bologna Annotation Resource Plus for functional and structural annotation of protein sequences.
NAR – Web server special issue 2011