:: DESCRIPTION
phylostan is a tool written in python for inferring phylogenetic trees from nucleotide datasets. It generates a variety of phylogenetic models using the Stan language.
::DEVELOPER
SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
:: DESCRIPTION
STAN implements bidirectional Hidden Markov Models (bdHMM), which are designed for studying directed genomic processes, such as gene transcription, DNA replication, recombination or DNA repair by integrating genomic data.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle.
Zacher B, Lidschreiber M, Cramer P, Gagneur J, Tresch A.
Mol Syst Biol. 2014 Dec 19;10:768. doi: 10.15252/msb.20145654.
