SSHscreen 2.0.1
:: DESCRIPTION
SSHscreen is the R software package for screening forward and reverse cDNA libraries enriched for cowpea drought response genes microarrays, (i) to normalize the data effectively using spike-in control spot normalization, and (ii) to select clones for sequencing based on the calculation of enrichment ratios with associated statistics.
::DEVELOPER
the Bioinformatics and Computational Biology Unit at the University of Pretoria
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows/Linux
- R package
:: DOWNLOAD
:: MORE INFORMATION
Citation
Coetzer N, Gazendam I, Oelofse D, Berger DK (2010)
SSHscreen and SSHdb, generic software for microarray based gene discovery: application to the stress response in cowpea.
Plant Methods 6: 10.