SPRINT – Scoring PRotein INTeractions

SPRINT

:: DESCRIPTION

SPRINT is a C++/OpenMP program that predicts protein-protein interactions.

::DEVELOPER

LUCIAN ILIE

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

SPRINT

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2017 Nov 15;18(1):485. doi: 10.1186/s12859-017-1871-x.
SPRINT: ultrafast protein-protein interaction prediction of the entire human interactome.
Li Y, Ilie L

SPRINT 1.0.7 – Parallel Framework for R

SPRINT 1.0.7

:: DESCRIPTION

SPRINT (Simple Parallel R INTerface) is a parallel framework for R. It provides an easy access to high performance computing for the analysis of high throughput post genomic data using the statistical programming language R.

::DEVELOPER

SPRINT Team <sprint@ed.ac.uk>, EPCC, The University of Edinburgh,

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Linux/ MacOsX
  • R package

:: DOWNLOAD

 SPRINT

:: MORE INFORMATION

Citation

SPRINT: a new parallel framework for R.
Hill J, Hambley M, Forster T, Mewissen M, Sloan TM, Scharinger F, Trew A, Ghazal P.
BMC Bioinformatics. 2008 Dec 29;9:558. doi: 10.1186/1471-2105-9-558.

SPRINT 3.0 – Side-chain PRediction INference Toolbox for Multistate Protein Design

SPRINT 3.0

:: DESCRIPTION

SPRINT is a software package that performs computational multistate protein design using state-of-the-art inference on probabilistic graphical models.

::DEVELOPER

Menachem Fromer and Chen Yanover

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

 SPRINT

:: MORE INFORMATION

Citation

Bioinformatics. 2010 Oct 1;26(19):2466-7. doi: 10.1093/bioinformatics/btq445. Epub 2010 Aug 4.
SPRINT: side-chain prediction inference toolbox for multistate protein design.
Fromer M1, Yanover C, Harel A, Shachar O, Weiss Y, Linial M.