SpolPred – Predict the Spoligotype from raw Sequence reads

SpolPred

:: DESCRIPTION

SpolPred is a software for rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences.

::DEVELOPER

PathogenSeq

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 SpolPred

:: MORE INFORMATION

Citation

Bioinformatics. 2012 Nov 15;28(22):2991-3. doi: 10.1093/bioinformatics/bts544. Epub 2012 Sep 26.
SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences.
Coll F1, Mallard K, Preston MD, Bentley S, Parkhill J, McNerney R, Martin N, Clark TG.