SPACC 2.0 – Spectral Analysis for Class Discovery and Classification

SPACC 2.0

:: DESCRIPTION

SPACC is a classifier that can perform both class discovery and classification

::DEVELOPER

Peng Qiu

:: SCREENSHOTS

SPACC

:: REQUIREMENTS

  • Windows
  • Matlab

:: DOWNLOAD

 SPACC

:: MORE INFORMATION

Citation

Peng Qiu, and Sylvia K. Plevritis,
Simultaneous Class Discovery and Classification of Microarray Data using Spectral Analysis“,
Journal of Computational Biology, 16(7):935-944, 2009.

OMWSA – Detection of DNA repeats using moving window Spectral Analysis

OMWSA

:: DESCRIPTION

OMWSA (optimized moving window spectral analysis) is a new method and a visualization tool for detecting DNA repeats in a 2D plane of location and frequency by using optimized moving window spectral analysis.

::DEVELOPER

 Hong Yan , Signal Processing Lab at City University of Hong Kong

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows

:: DOWNLOAD

 OMWSA

:: MORE INFORMATION

Citation:

Liping Du, Hongxia Zhou and Hong Yan
OMWSA: detection of DNA repeats using moving window spectral analysis
Bioinformatics (2007) 23 (5): 631-633.