Sarek 2.7.1
:: DESCRIPTION
Sarek is a workflow designed to detect variants on whole genome or targeted sequencing data. Initially designed for Human, and Mouse, it can work on any species with a reference genome. Sarek can also handle tumour / normal pairs and could include additional relapses.
::DEVELOPER
the Science for Life Laboratory
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Docker
:: DOWNLOAD
:: MORE INFORMATION
Citation
Garcia M, Juhos S, Larsson M, Olason PI, Martin M, Eisfeldt J, DiLorenzo S, Sandgren J, Díaz De Ståhl T, Ewels P, Wirta V, Nistér M, Käller M, Nystedt B.
Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants.
F1000Res. 2020 Jan 29;9:63. doi: 10.12688/f1000research.16665.2. PMID: 32269765; PMCID: PMC7111497.
