CREST 1.0.1

:: DESCRIPTION

CREST (clipping reveals structure) is an algorithm that uses next-generation sequencing reads with partial alignments to a reference genome to directly map structural variations at the nucleotide level of resolution.

::DEVELOPER

Zhang (Jinghui Zhang) Lab,St. Jude Children’s Research Hospital

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / Mac
• BLAT
• CAP3
• SAMtools
• bioperl
• Perl

:: DOWNLOAD

  CREST

:: MORE INFORMATION

Citation

Jianmin Wang et al.
CREST maps somatic structural variation in cancer genomes with base-pair resolution
Nature Methods 8, 652–654 (2011)