SKraken – Classification of Short Metagenomic Reads based on filtering uninformative k-mers

SKraken

:: DESCRIPTION

SKraken is an efficient approach to accurately classify metagenomic reads against a set of reference genomes, e.g. the NCBI/RefSeq database.

::DEVELOPER

Matteo Comin

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

SKraken

:: MORE INFORMATION

Citation

D. Marchiori, M. Comin
SKraken: Fast and Sensitive Classification of Short Metagenomic Reads based on Filtering Uninformative k-mers“.
In Proceedings of the 10th International Conference on Bioinformatics Models, Methods and Algorithms (Bioinformatics 2017), pp. 59-67