SIREN 1.0

:: DESCRIPTION

The SIREN algorithm can infer the regulatory type (positive or negative regulation) of interactions in a known gene regulatory network given corresponding genome-wide gene expression data.

::DEVELOPER

Bader Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows / Linux / Mac OsX
• Java
• Cytoscap

:: DOWNLOAD

 WordCloud

:: MORE INFORMATION

Citation

Algorithms Mol Biol. 2015 Jul 8;10:23. doi: 10.1186/s13015-015-0054-4. eCollection 2015.
Inferring interaction type in gene regulatory networks using co-expression data.
Khosravi P#, Gazestani VH#, Pirhaji L, Law B, Sadeghi M, Goliaei B, Bader GD.