Reaper 17-257 – Demultiplexing, Trimming and Filtering Short Read Sequencing data

Reaper 17-257

:: DESCRIPTION

Reaper is a program for demultiplexing, trimming and filtering short read sequencing data. It is intended to be suitable for dealing with a wide range of sequencing protocols, and will be updated to support new protocols where the current set of features does not suffice

::DEVELOPER

Stijn van Dongen

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / MacOsX /  Linux
  • C Compiler

:: DOWNLOAD

 Reaper

:: MORE INFORMATION

SeqEntropy 2.0.1 – Assessmemt tool of Sequence Repeats for Short Read Sequencing

SeqEntropy 2.0.1

:: DESCRIPTION

SeqEntropy is an assessmemt tool of sequence repeats for short read sequencing.

::DEVELOPER

Frank Hsueh-Ting Chu

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Java

:: DOWNLOAD

 SeqEntropy

:: MORE INFORMATION

Citation

PLoS One. 2013;8(3):e59484. doi: 10.1371/journal.pone.0059484. Epub 2013 Mar 27.
SeqEntropy: genome-wide assessment of repeats for short read sequencing.
Chu HT, Hsiao WW, Tsao TT, Hsu DF, Chen CC, Lee SA, Kao CY.