Shimmer 0.2
:: DESCRIPTION
Shimmer is a software package for the characterization of genetic differences between two very similar samples, e.g., a tumor sample and its matched normal tissue sample.
::DEVELOPER
NHGRI (the National Human Genome Research Institute)
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- samtools
- R package
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Bioinformatics. 2013 Jun 15;29(12):1498-503. doi: 10.1093/bioinformatics/btt183. Epub 2013 Apr 24.
Shimmer: detection of genetic alterations in tumors using next-generation sequence data.
Hansen NF, Gartner JJ, Mei L, Samuels Y, Mullikin JC.