Flower 0.7.2 – Extracting Information from SFF files

Flower 0.7.2

:: DESCRIPTION

Flower is tool for reformatting SFF files into other formats or tab-delimited

::DEVELOPER

Ketil Malde

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 Flower

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Apr 1;27(7):1041-2. doi: 10.1093/bioinformatics/btr063. Epub 2011 Feb 16.
Flower: extracting information from pyrosequencing data.
Malde K.

sff_extract 0.3.0 – Extract the reads from the sff files into Fasta / xml/ caf file

sff_extract 0.3.0

:: DESCRIPTION

sff_extract extracts the reads from the sff files and stores them into fasta and xml or caf text files. 454 sequence reads are usually stored in sff files. In these files the information about the reads is stored: sequence, quality and quality and adapter clips.

::DEVELOPER

Jose Blanca and Bastien Chevreux @ Bioinformatics at COMAV 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Python

:: DOWNLOAD

 sff_extract

:: MORE INFORMATION