Tag: Sequence

paircomp 1.0 – Ungapped Comparisons of Two Sequences

paircomp 1.0

:: DESCRIPTION

paircomp is a toolkit for doing ungapped comparisons of two DNA sequences. It contains a C++ library, several standalone command-line programs, and a Python interface to the C++ library.

::DEVELOPER

C. Titus Brown

:: SCREENSHOTS

Command Line

:: REQUIREMENTS

  • Windows / Mac OsX / Linux
  • python

:: DOWNLOAD

paircomp

:: MORE INFORMATION

Citation:

Paircomp, FamilyRelationsII and Cartwheel: tools for interspecific sequence comparison
Brown CT, Xie Y, Davidson EH, and Cameron RA.
BMC Bioinformatics 2005, 6:70. 24 Mar 2005

FamilyRelations II 20070330 – Comparative Sequence Analysis

FamilyRelations II 20070330

:: DESCRIPTION

FamilyRelations II (henceforth, “FR II”) is a program which lets you visually explore the results of various analyses; it’s what you use once you’ve set up an analysis and want to see the results.

::DEVELOPER

C. Titus Brown

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Mac OsX / Linux
  • JAVA

:: DOWNLOAD

FamilyRelations II

:: MORE INFORMATION

Citation:

Paircomp, FamilyRelationsII and Cartwheel: tools for interspecific sequence comparison
Brown CT, Xie Y, Davidson EH, and Cameron RA.
BMC Bioinformatics 2005, 6:70. 24 Mar 2005

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