SAMStat 1.5.1 – Display Sequence Statistics for Next Generation Sequencing

SAMStat 1.5.1

:: DESCRIPTION

SAMStat is an efficient C program to quickly display statistics of large sequence files from next generation sequencing projects.

::DEVELOPER

FANTOM

:: SCREENSHOTS

N/A

: REQUIREMENTS

  • Linux

:: DOWNLOAD

 SAMStat

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Jan 1;27(1):130-1. doi: 10.1093/bioinformatics/btq614. Epub 2010 Nov 18.
SAMStat: monitoring biases in next generation sequencing data.
Lassmann T1, Hayashizaki Y, Daub CO.

SeqState 1.4.1 – Primer Design, Sequence Statistics & Indel Coding

SeqState 1.4.1

:: DESCRIPTION

SeqState is a software for primer design and sequence statistics for phylogenetic DNA data sets.

::DEVELOPER

BioInfWeb projects

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows / Mac OsX
  • Java

:: DOWNLOAD

SeqState

:: MORE INFORMATION

Citation

Müller K:
SeqState primer design and sequence statistics for phylogenetic DNA data sets
Applied Bioinformatics 2005, 4:65-69

Müller K
Incorporating information from length-mutational events into phylogenetic analysis.
Molecular Phylogenetics and Evolution 2006, 38:667-676